BigWig Track#

Create a simple BigWigTrack Track.

chr19
array([<Axes: title={'center': 'chr19'}, ylabel='DNase'>,
       <Axes: ylabel='DNase'>], dtype=object)

from pygv.viewer import GenomeViewer
from pygv.tracks.bigwig_track import BigWigTrack
gv = GenomeViewer()
track = BigWigTrack(
    "../examples/data/K562_DNase_hg38_ENCFF413AHU.chr19.bigWig",
    name="DNase", )
gv.add_track(track)
bar_track = BigWigTrack(
    "../examples/data/K562_DNase_hg38_ENCFF413AHU.chr19.bigWig",
    name="DNase", plot_type="bar")
gv.add_track(bar_track)
gv.plot("chr19", 7496780, 7498169)

Total running time of the script: (0 minutes 0.115 seconds)

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