.. DO NOT EDIT.
.. THIS FILE WAS AUTOMATICALLY GENERATED BY SPHINX-GALLERY.
.. TO MAKE CHANGES, EDIT THE SOURCE PYTHON FILE:
.. "auto_examples/plot_bigwig.py"
.. LINE NUMBERS ARE GIVEN BELOW.

.. only:: html

    .. note::
        :class: sphx-glr-download-link-note

        :ref:`Go to the end <sphx_glr_download_auto_examples_plot_bigwig.py>`
        to download the full example code.

.. rst-class:: sphx-glr-example-title

.. _sphx_glr_auto_examples_plot_bigwig.py:


============
BigWig Track
============

Create a simple :class:`~pygv.tracks.bigwig_track.BigWigTrack` Track.

.. GENERATED FROM PYTHON SOURCE LINES 8-20



.. image-sg:: /auto_examples/images/sphx_glr_plot_bigwig_001.png
   :alt: chr19
   :srcset: /auto_examples/images/sphx_glr_plot_bigwig_001.png, /auto_examples/images/sphx_glr_plot_bigwig_001_2_00x.png 2.00x
   :class: sphx-glr-single-img


.. rst-class:: sphx-glr-script-out

 .. code-block:: none


    array([<Axes: title={'center': 'chr19'}, ylabel='DNase'>,
           <Axes: ylabel='DNase'>], dtype=object)





|

.. code-block:: Python

    from pygv.viewer import GenomeViewer
    from pygv.tracks.bigwig_track import BigWigTrack
    gv = GenomeViewer()
    track = BigWigTrack(
        "../examples/data/K562_DNase_hg38_ENCFF413AHU.chr19.bigWig",
        name="DNase", )
    gv.add_track(track)
    bar_track = BigWigTrack(
        "../examples/data/K562_DNase_hg38_ENCFF413AHU.chr19.bigWig",
        name="DNase", plot_type="bar")
    gv.add_track(bar_track)
    gv.plot("chr19", 7496780, 7498169)


.. rst-class:: sphx-glr-timing

   **Total running time of the script:** (0 minutes 0.115 seconds)


.. _sphx_glr_download_auto_examples_plot_bigwig.py:

.. only:: html

  .. container:: sphx-glr-footer sphx-glr-footer-example

    .. container:: sphx-glr-download sphx-glr-download-jupyter

      :download:`Download Jupyter notebook: plot_bigwig.ipynb <plot_bigwig.ipynb>`

    .. container:: sphx-glr-download sphx-glr-download-python

      :download:`Download Python source code: plot_bigwig.py <plot_bigwig.py>`

    .. container:: sphx-glr-download sphx-glr-download-zip

      :download:`Download zipped: plot_bigwig.zip <plot_bigwig.zip>`


.. only:: html

 .. rst-class:: sphx-glr-signature

    `Gallery generated by Sphinx-Gallery <https://sphinx-gallery.github.io>`_