.. DO NOT EDIT.
.. THIS FILE WAS AUTOMATICALLY GENERATED BY SPHINX-GALLERY.
.. TO MAKE CHANGES, EDIT THE SOURCE PYTHON FILE:
.. "auto_examples/plot_allowed_feature_lanes.py"
.. LINE NUMBERS ARE GIVEN BELOW.

.. only:: html

    .. note::
        :class: sphx-glr-download-link-note

        :ref:`Go to the end <sphx_glr_download_auto_examples_plot_allowed_feature_lanes.py>`
        to download the full example code.

.. rst-class:: sphx-glr-example-title

.. _sphx_glr_auto_examples_plot_allowed_feature_lanes.py:


==========================================
Adjust the number of feature lanes allowed
==========================================

.. GENERATED FROM PYTHON SOURCE LINES 7-36



.. image-sg:: /auto_examples/images/sphx_glr_plot_allowed_feature_lanes_001.png
   :alt: chr1
   :srcset: /auto_examples/images/sphx_glr_plot_allowed_feature_lanes_001.png, /auto_examples/images/sphx_glr_plot_allowed_feature_lanes_001_2_00x.png 2.00x
   :class: sphx-glr-single-img





.. code-block:: Python

    import matplotlib.pyplot as plt
    from pygv.viewer import GenomeViewer
    from pygv.tracks.bed_track import BedTrack
    from pygv.tracks.bigwig_track import PairedStrandSpecificTracks

    gv = GenomeViewer()
    unrestricted_track = BedTrack(
        "../examples/data/gencodeV24.sub.bed.gz",
        name="unlimited", height=1/2, line_width=0.5,
        show_name=True, y_label_rotation="vertical", y_label_ha="center")
    gv.add_track(unrestricted_track)
    max_6lanes_track = BedTrack(
        "../examples/data/gencodeV24.sub.bed.gz",
        name="max 6", height=1/2, allowed_feature_lanes=6, line_width=0.5,
        show_name=True, y_label_rotation="vertical", y_label_ha="center")
    gv.add_track(max_6lanes_track)
    max_2lanes_track = BedTrack(
        "../examples/data/gencodeV24.sub.bed.gz",
        name="max 2", height=1/2, allowed_feature_lanes=2, line_width=0.5,
        show_name=True, y_label_rotation="vertical", y_label_ha="center")
    gv.add_track(max_2lanes_track)
    tss_track = PairedStrandSpecificTracks(
        "../examples/data/K562_GROcap_hg38_pl.chr1.bw",
        "../examples/data/K562_GROcap_hg38_mn.chr1.bw",
        draw_y_independently=True,
        name="TSS", y_label_rotation="vertical", y_label_ha="center")
    gv.add_track(tss_track)
    gv.plot("chr1", 155135244, 155136169, height_scale_factor=0.4)
    plt.tight_layout()


.. rst-class:: sphx-glr-timing

   **Total running time of the script:** (0 minutes 0.530 seconds)


.. _sphx_glr_download_auto_examples_plot_allowed_feature_lanes.py:

.. only:: html

  .. container:: sphx-glr-footer sphx-glr-footer-example

    .. container:: sphx-glr-download sphx-glr-download-jupyter

      :download:`Download Jupyter notebook: plot_allowed_feature_lanes.ipynb <plot_allowed_feature_lanes.ipynb>`

    .. container:: sphx-glr-download sphx-glr-download-python

      :download:`Download Python source code: plot_allowed_feature_lanes.py <plot_allowed_feature_lanes.py>`

    .. container:: sphx-glr-download sphx-glr-download-zip

      :download:`Download zipped: plot_allowed_feature_lanes.zip <plot_allowed_feature_lanes.zip>`


.. only:: html

 .. rst-class:: sphx-glr-signature

    `Gallery generated by Sphinx-Gallery <https://sphinx-gallery.github.io>`_